Virtual Diegest (ISPaR) · T-RFLP Analysis (APLAUS+) · T-RFLP Analysis (PAT+) · P.S.P.A. · E.R.P.A.
October 31, 2014
  MiCA: Virtual Digest (ISPaR)
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Restriction sites are identified within the gene fragment delimited by the primers. The number of base pairs between the 5 and 3 primers and the proximal restriction sites are reported.
     
Forward Primer:
 
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Reverse Primer:
 
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Restriction Enzyme:
 
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Restriction Enzyme:
 
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Restriction Enzyme:
 
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Select Database:
 
Sensitivity:
  digest allows at most     mismatches within     bases from 5' end of primer
   
Report:
  Only the shortest ones All fragment lengths
Sort By:
  Forward fragments Reverse fragments Organism names
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If you use the data generated by MiCA in a publication, please cite:
Shyu, C., Soule, T., Bent, S.J., Foster, J.A., Forney, L.J. (2007) MiCA: A Web-Based Tool for the Analysis of Microbial Communities Based on Terminal-Restriction Fragment Length Polymorphisms of 16S and 18S rRNA Genes. Journal of Microbial Ecology 53:562-570.

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Last updated on September 23 2005 13:05:38.