Virtual Diegest (ISPaR) · T-RFLP Analysis (APLAUS+) · T-RFLP Analysis (PAT+) · P.S.P.A. · E.R.P.A.
March 9, 2014
  MiCA: Primer Sequence Prevalence Analysis
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Restriction sites are identified within the gene fragment delimited by the primers. The number of base pairs between the 5’ and 3’ primers and the proximal restriction sites are reported.
     
Forward Primer:
  
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Forward Primer:
  
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Reverse Primer:
  
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Reverse Primer:
  
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Sensitivity:
   digest allows at most     mismatches within     bases from 5' end of primer
   
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If you use the data generated by MiCA in a publication, please cite:
Shyu, C., Soule, T., Bent, S.J., Foster, J.A., Forney, L.J. (2007) MiCA: A Web-Based Tool for the Analysis of Microbial Communities Based on Terminal-Restriction Fragment Length Polymorphisms of 16S and 18S rRNA Genes. Journal of Microbial Ecology 53:562-570.
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Last updated on December 28 2009 17:36:21.