Virtual Diegest (ISPaR) · T-RFLP Analysis (APLAUS+) · T-RFLP Analysis (PAT+) · P.S.P.A. · E.R.P.A.
December 9, 2013
  MiCA: Primer Sequence Prevalence Analysis
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APLAUS+ compares the data from one or more T-RFLP profiles to the outcomes of in silico analyses of sequences in the database done using the same primers and enzymes.
     
Forward Primer:
  
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Forward Primer:
  
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Reverse Primer:
  
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Reverse Primer:
  
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Select Database:
  
Sensitivity:
   digest allows at most     mismatches within     bases from 5' end of primer
   
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If you use the data generated by MiCA in a publication, please cite:
Shyu, C., Soule, T., Bent, S.J., Foster, J.A., Forney, L.J. (2007) MiCA: A Web-Based Tool for the Analysis of Microbial Communities Based on Terminal-Restriction Fragment Length Polymorphisms of 16S and 18S rRNA Genes. Journal of Microbial Ecology 53:562-570.
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Last updated on December 28 2009 17:36:21.